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Pharmacophore Guided Docking (Updated Nov 9 2025)
This tutorial demonstrates how to apply pharmacophore-guided docking to dock a series of ligands using information derived from the binding mode of a reference co-crystal structure. The case study is based on a research article describing c-Jun N-Terminal Kinase inhibitors.let's start by examining results of free docking of a chosen ligand set to c-Jun N-terminal kinases (JNK1).  

Using Pharmacophore-Guided Docking

Explore how incorporating a pharmacophore model during docking improves pose accuracy by preserving essential ligand–receptor interactions

Pharmacophore Guided Docking (Updated Nov 9 2025)